J4_9TZ9_009

3D structure

PDB id

9TZ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Empty 50S Subunit of the Coxiella burnetii Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

CUG*CG*CCUAAGGUAG*CGAAUG

Length

21 nucleotides

Bulged bases

9TZ9|1|a|U|1987

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TZ9|1|a|C|1847
9TZ9|1|a|U|1848
9TZ9|1|a|G|1849
*
9TZ9|1|a|C|1921
9TZ9|1|a|G|1922
*
9TZ9|1|a|C|1940
9TZ9|1|a|C|1941
9TZ9|1|a|U|1942
9TZ9|1|a|A|1943
9TZ9|1|a|A|1944
9TZ9|1|a|G|1945
9TZ9|1|a|G|1946
9TZ9|1|a|U|1947
9TZ9|1|a|A|1948
9TZ9|1|a|G|1949
*
9TZ9|1|a|C|1983
9TZ9|1|a|G|1984
9TZ9|1|a|A|1985
9TZ9|1|a|A|1986
9TZ9|1|a|U|1987
9TZ9|1|a|G|1988

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain o

Large ribosomal subunit protein uL2