J4_9UWH_003

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCCUG*CAUCAC*GCACCG*CUCCAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9UWH|1|A|G|2492
9UWH|1|A|C|2493
9UWH|1|A|C|2494
9UWH|1|A|U|2495
9UWH|1|A|G|2496
*
9UWH|1|A|C|2508
9UWH|1|A|A|2509
9UWH|1|A|U|2510
9UWH|1|A|C|2511
9UWH|1|A|A|2512
9UWH|1|A|C|2513
*
9UWH|1|A|G|2537
9UWH|1|A|C|2538
9UWH|1|A|A|2539
9UWH|1|A|C|2540
9UWH|1|A|C|2541
9UWH|1|A|G|2542
*
9UWH|1|A|C|2637
9UWH|1|A|U|2638
9UWH|1|A|C|2639
9UWH|1|A|C|2640
9UWH|1|A|A|2641
9UWH|1|A|C|2642

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain A3

Small ribosomal subunit protein mS38

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain D

Large ribosomal subunit protein uL2m