J4_9UWH_006

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CAAG*CGUUCCAG*CAC*GAAACAG

Length

22 nucleotides

Bulged bases

9UWH|1|AA|U|711, 9UWH|1|AA|C|815

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9UWH|1|AA|C|698
9UWH|1|AA|A|699
9UWH|1|AA|A|700
9UWH|1|AA|G|701
*
9UWH|1|AA|C|708
9UWH|1|AA|G|709
9UWH|1|AA|U|710
9UWH|1|AA|U|711
9UWH|1|AA|C|712
9UWH|1|AA|C|713
9UWH|1|AA|A|714
9UWH|1|AA|G|715
*
9UWH|1|AA|C|800
9UWH|1|AA|A|801
9UWH|1|AA|C|802
*
9UWH|1|AA|G|811
9UWH|1|AA|A|812
9UWH|1|AA|A|813
9UWH|1|AA|A|814
9UWH|1|AA|C|815
9UWH|1|AA|A|816
9UWH|1|AA|G|817

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A0

Small ribosomal subunit protein mS34

Chain AM

Small ribosomal subunit protein bS16m

Chain AU

Small ribosomal subunit protein mS26

Chain L

Large ribosomal subunit protein uL14m