J4_9VXM_003
3D structure
- PDB id
- 9VXM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitoribosome in a non-rotated state, with multiple neomycin molecules bound, featuring A/A-site and P/P-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GCCUG*CAUCAC*GCACCG*CUCCAC
- Length
- 23 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9VXM|1|A|G|2492
9VXM|1|A|C|2493
9VXM|1|A|C|2494
9VXM|1|A|U|2495
9VXM|1|A|G|2496
*
9VXM|1|A|C|2508
9VXM|1|A|A|2509
9VXM|1|A|U|2510
9VXM|1|A|C|2511
9VXM|1|A|A|2512
9VXM|1|A|C|2513
*
9VXM|1|A|G|2537
9VXM|1|A|C|2538
9VXM|1|A|A|2539
9VXM|1|A|C|2540
9VXM|1|A|C|2541
9VXM|1|A|G|2542
*
9VXM|1|A|C|2637
9VXM|1|A|U|2638
9VXM|1|A|C|2639
9VXM|1|A|C|2640
9VXM|1|A|A|2641
9VXM|1|A|C|2642
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain A3
- Small ribosomal subunit protein mS38
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain D
- Large ribosomal subunit protein uL2m
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