J4_9WW6_009
3D structure
- PDB id
- 9WW6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome delta eL41 non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.83 Å
Loop
- Sequence
- CUG*CG*CUUAAGGUAG*UGAA(UY1)G
- Length
- 21 nucleotides
- Bulged bases
- 9WW6|1|AA|UY1|3818
- QA status
- Modified nucleotides: UY1
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9WW6|1|AA|C|3696
9WW6|1|AA|U|3697
9WW6|1|AA|G|3698
*
9WW6|1|AA|C|3752
9WW6|1|AA|G|3753
*
9WW6|1|AA|C|3771
9WW6|1|AA|U|3772
9WW6|1|AA|U|3773
9WW6|1|AA|A|3774
9WW6|1|AA|A|3775
9WW6|1|AA|G|3776
9WW6|1|AA|G|3777
9WW6|1|AA|U|3778
9WW6|1|AA|A|3779
9WW6|1|AA|G|3780
*
9WW6|1|AA|U|3814
9WW6|1|AA|G|3815
9WW6|1|AA|A|3816
9WW6|1|AA|A|3817
9WW6|1|AA|UY1|3818
9WW6|1|AA|G|3819
Current chains
- Chain AA
- 28S rRNA (3773-MER)
Nearby chains
- Chain AD
- 60S ribosomal protein L8
- Chain BA
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: