J4_9XFL_005

3D structure

PDB id

9XFL (explore in PDB, NAKB, or RNA 3D Hub)

Description

In vitro structure of bacterial 50S ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.16 Å

Loop

Sequence

GGUUC*GGUGAG*CU*AAUCGUAC

Length

21 nucleotides

Bulged bases

9XFL|1|I|G|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9XFL|1|I|G|1310
9XFL|1|I|G|1311
9XFL|1|I|U|1312
9XFL|1|I|U|1313
9XFL|1|I|C|1314
*
9XFL|1|I|G|1338
9XFL|1|I|G|1339
9XFL|1|I|U|1340
9XFL|1|I|G|1341
9XFL|1|I|A|1342
9XFL|1|I|G|1343
*
9XFL|1|I|C|1404
9XFL|1|I|U|1405
*
9XFL|1|I|A|1597
9XFL|1|I|A|1598
9XFL|1|I|U|1599
9XFL|1|I|C|1600
9XFL|1|I|G|1601
9XFL|1|I|U|1602
9XFL|1|I|A|1603
9XFL|1|I|C|1604

Current chains

Chain I

23S rRNA

Nearby chains

Chain b

50S ribosomal protein L23

Chain k

50S ribosomal protein L34