J4_9XTD_004
3D structure
- PDB id
- 9XTD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli delta lepA 30S ribosomal subunit class B, body domain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.26 Å
Loop
- Sequence
- ACGGG*UUGUACAC*GUA*UGGAU
- Length
- 21 nucleotides
- Bulged bases
- 9XTD|1|A|G|926, 9XTD|1|A|G|1529
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9XTD|1|A|A|923
9XTD|1|A|C|924
9XTD|1|A|G|925
9XTD|1|A|G|926
9XTD|1|A|G|927
*
9XTD|1|A|U|1390
9XTD|1|A|U|1391
9XTD|1|A|G|1392
9XTD|1|A|U|1393
9XTD|1|A|A|1394
9XTD|1|A|C|1395
9XTD|1|A|A|1396
9XTD|1|A|C|1397
*
9XTD|1|A|G|1505
9XTD|1|A|U|1506
9XTD|1|A|A|1507
*
9XTD|1|A|U|1528
9XTD|1|A|G|1529
9XTD|1|A|G|1530
9XTD|1|A|A|1531
9XTD|1|A|U|1532
Current chains
- Chain A
- RNA (1128-MER)
Nearby chains
- Chain E
- Small ribosomal subunit protein uS5
- Chain K
- Small ribosomal subunit protein uS11
Coloring options: