J4_9Y49_005

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

9Y49|1|A6|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|A6|G|2618
9Y49|1|A6|G|2619
*
9Y49|1|A6|U|2637
9Y49|1|A6|G|2638
9Y49|1|A6|U|2639
9Y49|1|A6|G|2640
9Y49|1|A6|A|2641
9Y49|1|A6|A|2642
*
9Y49|1|A6|U|2692
9Y49|1|A6|G|2693
9Y49|1|A6|G|2694
9Y49|1|A6|A|2695
9Y49|1|A6|A|2696
9Y49|1|A6|A|2697
9Y49|1|A6|G|2698
*
9Y49|1|A6|U|2718
9Y49|1|A6|C|2719

Current chains

Chain A6

LSU-beta rRNA (2069-MER)

Nearby chains

Chain CR

Large ribosomal subunit protein eL19

Chain CU

60S ribosomal protein L22

Chain Cg

60S ribosomal protein L34

Chain Ck

60S ribosomal protein L38