J4_9Y49_007

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUG*CG*CUUAAGGUAG*UGAAUG

Length

21 nucleotides

Bulged bases

9Y49|1|A6|U|3818

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|A6|C|3696
9Y49|1|A6|U|3697
9Y49|1|A6|G|3698
*
9Y49|1|A6|C|3752
9Y49|1|A6|G|3753
*
9Y49|1|A6|C|3771
9Y49|1|A6|U|3772
9Y49|1|A6|U|3773
9Y49|1|A6|A|3774
9Y49|1|A6|A|3775
9Y49|1|A6|G|3776
9Y49|1|A6|G|3777
9Y49|1|A6|U|3778
9Y49|1|A6|A|3779
9Y49|1|A6|G|3780
*
9Y49|1|A6|U|3814
9Y49|1|A6|G|3815
9Y49|1|A6|A|3816
9Y49|1|A6|A|3817
9Y49|1|A6|U|3818
9Y49|1|A6|G|3819

Current chains

Chain A6

LSU-beta rRNA (2069-MER)

Nearby chains

Chain B2

Small subunit ribosomal RNA; SSU rRNA

Chain CA

60S ribosomal protein L8

Chain Cn

60S ribosomal protein L41