J4_9Y49_008

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUAAG*UUGAU*ACC*GGG

Length

16 nucleotides

Bulged bases

9Y49|1|A6|A|4234, 9Y49|1|A6|G|4329

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|A6|C|4231
9Y49|1|A6|U|4232
9Y49|1|A6|A|4233
9Y49|1|A6|A|4234
9Y49|1|A6|G|4235
*
9Y49|1|A6|U|4289
9Y49|1|A6|U|4290
9Y49|1|A6|G|4291
9Y49|1|A6|A|4292
9Y49|1|A6|U|4293
*
9Y49|1|A6|A|4317
9Y49|1|A6|C|4318
9Y49|1|A6|C|4319
*
9Y49|1|A6|G|4328
9Y49|1|A6|G|4329
9Y49|1|A6|G|4330

Current chains

Chain A6

LSU-beta rRNA (2069-MER)

Nearby chains

Chain A5

Large subunit ribosomal RNA; LSU rRNA

Chain CD

60S ribosomal protein L5

Chain CT

60S ribosomal protein L21

Chain Cb

60S ribosomal protein L29

Chain Co

60S ribosomal protein L36a