J5_11EL_002
3D structure
- PDB id
- 11EL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Vibrio cholerae (VC-ST)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUGGCG*CGCGUG*CUUUCAG*CAGAAGAAG*CAAG
- Length
- 32 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
11EL|1|A|C|36
11EL|1|A|U|37
11EL|1|A|G|38
11EL|1|A|G|39
11EL|1|A|C|40
11EL|1|A|G|41
*
11EL|1|A|C|401
11EL|1|A|G|402
11EL|1|A|C|403
11EL|1|A|G|404
11EL|1|A|U|405
11EL|1|A|G|406
*
11EL|1|A|C|436
11EL|1|A|U|437
11EL|1|A|U|438
11EL|1|A|U|439
11EL|1|A|C|440
11EL|1|A|A|441
11EL|1|A|G|442
*
11EL|1|A|C|492
11EL|1|A|A|493
11EL|1|A|G|494
11EL|1|A|A|495
11EL|1|A|A|496
11EL|1|A|G|497
11EL|1|A|A|498
11EL|1|A|A|499
11EL|1|A|G|500
*
11EL|1|A|C|545
11EL|1|A|A|546
11EL|1|A|A|547
11EL|1|A|G|548
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain D
- Small ribosomal subunit protein uS4
- Chain L
- Small ribosomal subunit protein uS12
- Chain P
- Small ribosomal subunit protein bS16
Coloring options: