J5_1I97_001
3D structure
- PDB id
- 1I97 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.5 Å
Loop
- Sequence
- CUGG*CUUG*CUGAACC*GGGUAAUAGCGCCG*CGCGGUAAUACGGAGGGCGCGAG
- Length
- 52 nucleotides
- Bulged bases
- 1I97|1|A|G|513, 1I97|1|A|U|514, 1I97|1|A|A|515, 1I97|1|A|U|517
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1I97|1|A|C|36
1I97|1|A|U|37
1I97|1|A|G|38
1I97|1|A|G|39
*
1I97|1|A|C|398
1I97|1|A|U|399
1I97|1|A|U|400
1I97|1|A|G|401
*
1I97|1|A|C|431
1I97|1|A|U|432
1I97|1|A|G|433
1I97|1|A|A|434
1I97|1|A|A|435
1I97|1|A|C|436
1I97|1|A|C|437
*
1I97|1|A|G|475
1I97|1|A|G|476
1I97|1|A|G|477
1I97|1|A|U|478
1I97|1|A|A|479
1I97|1|A|A|480
1I97|1|A|U|481
1I97|1|A|A|482
1I97|1|A|G|483
1I97|1|A|C|484
1I97|1|A|G|485
1I97|1|A|C|486
1I97|1|A|C|487
1I97|1|A|G|488
*
1I97|1|A|C|509
1I97|1|A|G|510
1I97|1|A|C|511
1I97|1|A|G|512
1I97|1|A|G|513
1I97|1|A|U|514
1I97|1|A|A|515
1I97|1|A|A|516
1I97|1|A|U|517
1I97|1|A|A|518
1I97|1|A|C|519
1I97|1|A|G|520
1I97|1|A|G|521
1I97|1|A|A|522
1I97|1|A|G|523
1I97|1|A|G|524
1I97|1|A|G|525
1I97|1|A|C|526
1I97|1|A|G|527
1I97|1|A|C|528
1I97|1|A|G|529
1I97|1|A|A|530
1I97|1|A|G|531
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain C
- 30S RIBOSOMAL PROTEIN S3
- Chain D
- 30S RIBOSOMAL PROTEIN S4
- Chain L
- 30S RIBOSOMAL PROTEIN S12
Coloring options: