J5_1I97_004

3D structure

PDB id

1I97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE

Experimental method

X-RAY DIFFRACTION

Resolution

4.5 Å

Loop

Sequence

CAUGCAAG*CGGACGGGU*ACAG*CACU*AGGCAGCAG

Length

34 nucleotides

Bulged bases

1I97|1|A|A|102

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1I97|1|A|C|54
1I97|1|A|A|55
1I97|1|A|U|56
1I97|1|A|G|57
1I97|1|A|C|58
1I97|1|A|A|59
1I97|1|A|A|60
1I97|1|A|G|61
*
1I97|1|A|C|99
1I97|1|A|G|100
1I97|1|A|G|101
1I97|1|A|A|102
1I97|1|A|C|103
1I97|1|A|G|104
1I97|1|A|G|105
1I97|1|A|G|106
1I97|1|A|U|107
*
1I97|1|A|A|308
1I97|1|A|C|309
1I97|1|A|A|310
1I97|1|A|G|311
*
1I97|1|A|C|332
1I97|1|A|A|333
1I97|1|A|C|334
1I97|1|A|U|335
*
1I97|1|A|A|344
1I97|1|A|G|345
1I97|1|A|G|346
1I97|1|A|C|347
1I97|1|A|A|348
1I97|1|A|G|349
1I97|1|A|C|350
1I97|1|A|A|351
1I97|1|A|G|352

Current chains

Chain A

16S RRNA

Nearby chains

Chain P

30S RIBOSOMAL PROTEIN S16

Chain T

30S RIBOSOMAL PROTEIN S20