J5_1JZX_004

3D structure

PDB id

1JZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in Eubacteria

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

ACUUUGCAAUCUCAC*GUC*GC*GUGAAUAGG*CGCUGU

Length

35 nucleotides

Bulged bases

1JZX|1|A|G|1749, 1JZX|1|A|G|1754, 1JZX|1|A|G|1975

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1JZX|1|A|A|1686
1JZX|1|A|C|1687
1JZX|1|A|U|1688
1JZX|1|A|U|1689
1JZX|1|A|U|1690
1JZX|1|A|G|1691
1JZX|1|A|C|1692
1JZX|1|A|A|1693
1JZX|1|A|A|1694
1JZX|1|A|U|1695
1JZX|1|A|C|1696
1JZX|1|A|U|1697
1JZX|1|A|C|1698
1JZX|1|A|A|1699
1JZX|1|A|C|1700
*
1JZX|1|A|G|1722
1JZX|1|A|U|1723
1JZX|1|A|C|1724
*
1JZX|1|A|G|1742
1JZX|1|A|C|1743
*
1JZX|1|A|G|1747
1JZX|1|A|U|1748
1JZX|1|A|G|1749
1JZX|1|A|A|1750
1JZX|1|A|A|1751
1JZX|1|A|U|1752
1JZX|1|A|A|1753
1JZX|1|A|G|1754
1JZX|1|A|G|1755
*
1JZX|1|A|C|1971
1JZX|1|A|G|1972
1JZX|1|A|C|1973
1JZX|1|A|U|1974
1JZX|1|A|G|1975
1JZX|1|A|U|1976

Current chains

Chain A

23S rRNA

Nearby chains