J5_1JZZ_005
3D structure
- PDB id
- 1JZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in Eubacteria
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- AAAAGACC*GGAUAACA*UCGAUGUC*GGUUCAG*CGGUCU
- Length
- 37 nucleotides
- Bulged bases
- 1JZZ|1|A|A|2045, 1JZZ|1|A|A|2427, 1JZZ|1|A|U|2588, 1JZZ|1|A|C|2589
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1JZZ|1|A|A|2040
1JZZ|1|A|A|2041
1JZZ|1|A|A|2042
1JZZ|1|A|A|2043
1JZZ|1|A|G|2044
1JZZ|1|A|A|2045
1JZZ|1|A|C|2046
1JZZ|1|A|C|2047
*
1JZZ|1|A|G|2425
1JZZ|1|A|G|2426
1JZZ|1|A|A|2427
1JZZ|1|A|U|2428
1JZZ|1|A|A|2429
1JZZ|1|A|A|2430
1JZZ|1|A|C|2431
1JZZ|1|A|A|2432
*
1JZZ|1|A|U|2479
1JZZ|1|A|C|2480
1JZZ|1|A|G|2481
1JZZ|1|A|A|2482
1JZZ|1|A|U|2483
1JZZ|1|A|G|2484
1JZZ|1|A|U|2485
1JZZ|1|A|C|2486
*
1JZZ|1|A|G|2561
1JZZ|1|A|G|2562
1JZZ|1|A|U|2563
1JZZ|1|A|U|2564
1JZZ|1|A|C|2565
1JZZ|1|A|A|2566
1JZZ|1|A|G|2567
*
1JZZ|1|A|C|2585
1JZZ|1|A|G|2586
1JZZ|1|A|G|2587
1JZZ|1|A|U|2588
1JZZ|1|A|C|2589
1JZZ|1|A|U|2590
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain K
- Ribosomal Protein L4
- Chain M
- Ribosomal Protein L32
Coloring options: