J5_1M1K_001
3D structure
- PDB id
- 1M1K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Co-crystal structure of azithromycin bound to the 50S ribosomal subunit of Haloarcula marismortui
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- UGAUGAAG*CGAAUG*CU*ACAA*UGA
- Length
- 23 nucleotides
- Bulged bases
- 1M1K|1|A|U|46
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1M1K|1|A|U|43
1M1K|1|A|G|44
1M1K|1|A|A|45
1M1K|1|A|U|46
1M1K|1|A|G|47
1M1K|1|A|A|48
1M1K|1|A|A|49
1M1K|1|A|G|50
*
1M1K|1|A|C|111
1M1K|1|A|G|112
1M1K|1|A|A|113
1M1K|1|A|A|114
1M1K|1|A|U|115
1M1K|1|A|G|116
*
1M1K|1|A|C|124
1M1K|1|A|U|125
*
1M1K|1|A|A|129
1M1K|1|A|C|130
1M1K|1|A|A|131
1M1K|1|A|A|132
*
1M1K|1|A|U|146
1M1K|1|A|G|147
1M1K|1|A|A|148
Current chains
- Chain A
- 23S RRNA
Nearby chains
- Chain 2
- RIBOSOMAL PROTEIN L37E
- Chain 3
- RIBOSOMAL PROTEIN L39E
- Chain N
- RIBOSOMAL PROTEIN L15E
- Chain T
- RIBOSOMAL PROTEIN L23
Coloring options: