J5_1VVJ_003
3D structure
- PDB id
- 1VVJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.44 Å
Loop
- Sequence
- CGAUGAAG*CGAAUG*CG*CACC*GGGG
- Length
- 24 nucleotides
- Bulged bases
- 1VVJ|1|RA|U|50
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1VVJ|1|RA|C|47
1VVJ|1|RA|G|48
1VVJ|1|RA|A|49
1VVJ|1|RA|U|50
1VVJ|1|RA|G|51
1VVJ|1|RA|A|52
1VVJ|1|RA|A|53
1VVJ|1|RA|G|54
*
1VVJ|1|RA|C|116
1VVJ|1|RA|G|117
1VVJ|1|RA|A|118
1VVJ|1|RA|A|119
1VVJ|1|RA|U|120
1VVJ|1|RA|G|121
*
1VVJ|1|RA|C|130
1VVJ|1|RA|G|131
*
1VVJ|1|RA|C|148
1VVJ|1|RA|A|149
1VVJ|1|RA|C|150
1VVJ|1|RA|C|151
*
1VVJ|1|RA|G|175
1VVJ|1|RA|G|176
1VVJ|1|RA|G|177
1VVJ|1|RA|G|178
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R1
- 50S ribosomal protein L28
- Chain R7
- 50S ribosomal protein L35
- Chain RX
- 50S ribosomal protein L23
Coloring options: