J5_1VVJ_007
3D structure
- PDB id
- 1VVJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.44 Å
Loop
- Sequence
- CGAG*CGUAG*CGAG*CGCAAGC*GCAAAG
- Length
- 26 nucleotides
- Bulged bases
- 1VVJ|1|RA|A|654
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1VVJ|1|RA|C|601
1VVJ|1|RA|G|602
1VVJ|1|RA|A|603
1VVJ|1|RA|G|604
*
1VVJ|1|RA|C|624
1VVJ|1|RA|G|625
1VVJ|1|RA|U|626
1VVJ|1|RA|A|627
1VVJ|1|RA|G|628
*
1VVJ|1|RA|C|635
1VVJ|1|RA|G|636
1VVJ|1|RA|A|637
1VVJ|1|RA|G|638
*
1VVJ|1|RA|C|650
1VVJ|1|RA|G|651
1VVJ|1|RA|C|652
1VVJ|1|RA|A|653
1VVJ|1|RA|A|654
1VVJ|1|RA|G|654|||A
1VVJ|1|RA|C|654|||B
*
1VVJ|1|RA|G|654|||S
1VVJ|1|RA|C|654|||T
1VVJ|1|RA|A|654|||U
1VVJ|1|RA|A|654|||V
1VVJ|1|RA|A|655
1VVJ|1|RA|G|656
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R8
- tRNA acceptor end mimic
- Chain RF
- 50S ribosomal protein L4
- Chain RP
- 50S ribosomal protein L15
Coloring options: