J5_22TU_007
3D structure
- PDB id
- 22TU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome in complex with DHX29
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUUGU*AAAUAAC*GGAAUGAG*CGAGGAUCCAU*AUAG
- Length
- 35 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
22TU|1|S2|C|30
22TU|1|S2|U|31
22TU|1|S2|U|32
22TU|1|S2|G|33
22TU|1|S2|U|34
*
22TU|1|S2|A|521
22TU|1|S2|A|522
22TU|1|S2|A|523
22TU|1|S2|U|524
22TU|1|S2|A|525
22TU|1|S2|A|526
22TU|1|S2|C|527
*
22TU|1|S2|G|558
22TU|1|S2|G|559
22TU|1|S2|A|560
22TU|1|S2|A|561
22TU|1|S2|U|562
22TU|1|S2|G|563
22TU|1|S2|A|564
22TU|1|S2|G|565
*
22TU|1|S2|C|585
22TU|1|S2|G|586
22TU|1|S2|A|587
22TU|1|S2|G|588
22TU|1|S2|G|589
22TU|1|S2|A|590
22TU|1|S2|U|591
22TU|1|S2|C|592
22TU|1|S2|C|593
22TU|1|S2|A|594
22TU|1|S2|U|595
*
22TU|1|S2|A|641
22TU|1|S2|U|642
22TU|1|S2|A|643
22TU|1|S2|G|644
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain DH
- ATP-dependent RNA helicase DHX29
- Chain SJ
- 40S ribosomal protein S9
- Chain SX
- 40S ribosomal protein S23
- Chain Se
- Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein
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