J5_2NQP_001

3D structure

PDB id

2NQP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

AUGG*CAA*UCG*UGUGC*GCU

Length

18 nucleotides

Bulged bases

2NQP|1|F|U|8, 2NQP|1|F|G|9, 2NQP|1|F|U|48, 2NQP|1|F|C|65

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2NQP|1|F|A|7
2NQP|1|F|U|8
2NQP|1|F|G|9
2NQP|1|F|G|10
*
2NQP|1|F|C|25
2NQP|1|F|A|26
2NQP|1|F|A|27
*
2NQP|1|F|U|43
2NQP|1|F|C|44
2NQP|1|F|G|45|||A
*
2NQP|1|F|U|46|||L
2NQP|1|F|G|47
2NQP|1|F|U|48
2NQP|1|F|G|49
2NQP|1|F|C|50
*
2NQP|1|F|G|64
2NQP|1|F|C|65
2NQP|1|F|U|66

Current chains

Chain F

transfer RNA

Nearby chains

Chain A

tRNA pseudouridine synthase A

Chain D

tRNA pseudouridine synthase A