J5_2QA4_008
3D structure
- PDB id
- 2QA4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A more complete structure of the the L7/L12 stalk of the Haloarcula marismortui 50S large ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGAAGACCC*GGGAUAACAG*CCUCGAUGU*G(UR3)U(PSU)AG*CGGCUG
- Length
- 40 nucleotides
- Bulged bases
- 2QA4|1|0|A|2483
- QA status
- Modified nucleotides: UR3, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
2QA4|1|0|C|2098
2QA4|1|0|G|2099
2QA4|1|0|A|2100
2QA4|1|0|A|2101
2QA4|1|0|G|2102
2QA4|1|0|A|2103
2QA4|1|0|C|2104
2QA4|1|0|C|2105
2QA4|1|0|C|2106
*
2QA4|1|0|G|2480
2QA4|1|0|G|2481
2QA4|1|0|G|2482
2QA4|1|0|A|2483
2QA4|1|0|U|2484
2QA4|1|0|A|2485
2QA4|1|0|A|2486
2QA4|1|0|C|2487
2QA4|1|0|A|2488
2QA4|1|0|G|2489
*
2QA4|1|0|C|2533
2QA4|1|0|C|2534
2QA4|1|0|U|2535
2QA4|1|0|C|2536
2QA4|1|0|G|2537
2QA4|1|0|A|2538
2QA4|1|0|U|2539
2QA4|1|0|G|2540
2QA4|1|0|U|2541
*
2QA4|1|0|G|2618
2QA4|1|0|UR3|2619
2QA4|1|0|U|2620
2QA4|1|0|PSU|2621
2QA4|1|0|A|2622
2QA4|1|0|G|2623
*
2QA4|1|0|C|2641
2QA4|1|0|G|2642
2QA4|1|0|G|2643
2QA4|1|0|C|2644
2QA4|1|0|U|2645
2QA4|1|0|G|2646
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain A
- 50S ribosomal protein L2P
- Chain B
- 50S ribosomal protein L3P
- Chain C
- 50S ribosomal protein L4P
- Chain L
- 50S ribosomal protein L15P
Coloring options: