J5_2UXC_001
3D structure
- PDB id
- 2UXC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA UCGU in the context of the Thermus thermophilus 30S subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CUGG*CUUG*CUGAACCCG*CGGGGUAAUAG*CGAG
- Length
- 32 nucleotides
- Bulged bases
- 2UXC|1|A|C|443
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
2UXC|1|A|C|36
2UXC|1|A|U|37
2UXC|1|A|G|38
2UXC|1|A|G|39
*
2UXC|1|A|C|403
2UXC|1|A|U|404
2UXC|1|A|U|405
2UXC|1|A|G|406
*
2UXC|1|A|C|436
2UXC|1|A|U|437
2UXC|1|A|G|438
2UXC|1|A|A|439
2UXC|1|A|A|440
2UXC|1|A|C|442
2UXC|1|A|C|443
2UXC|1|A|C|444
2UXC|1|A|G|445
*
2UXC|1|A|C|489
2UXC|1|A|G|490
2UXC|1|A|G|491
2UXC|1|A|G|492
2UXC|1|A|G|494
2UXC|1|A|U|495
2UXC|1|A|A|496
2UXC|1|A|A|497
2UXC|1|A|U|498
2UXC|1|A|A|499
2UXC|1|A|G|500
*
2UXC|1|A|C|545
2UXC|1|A|G|546
2UXC|1|A|A|547
2UXC|1|A|G|548
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain D
- RIBOSOMAL PROTEIN S4
- Chain L
- RIBOSOMAL PROTEIN S12
Coloring options: