J5_3CPW_007
3D structure
- PDB id
- 3CPW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the antibiotic LINEZOLID bound to the large ribosomal subunit of HALOARCULA MARISMORTUI
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- CAAAGACC*GGAUAACA*UCGAUGU*GUUUAG*CGGCUG
- Length
- 35 nucleotides
- Bulged bases
- 3CPW|1|0|A|2103, 3CPW|1|0|A|2483, 3CPW|1|0|C|2644, 3CPW|1|0|U|2645
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3CPW|1|0|C|2098
3CPW|1|0|A|2099
3CPW|1|0|A|2100
3CPW|1|0|A|2101
3CPW|1|0|G|2102
3CPW|1|0|A|2103
3CPW|1|0|C|2104
3CPW|1|0|C|2105
*
3CPW|1|0|G|2481
3CPW|1|0|G|2482
3CPW|1|0|A|2483
3CPW|1|0|U|2484
3CPW|1|0|A|2485
3CPW|1|0|A|2486
3CPW|1|0|C|2487
3CPW|1|0|A|2488
*
3CPW|1|0|U|2535
3CPW|1|0|C|2536
3CPW|1|0|G|2537
3CPW|1|0|A|2538
3CPW|1|0|U|2539
3CPW|1|0|G|2540
3CPW|1|0|U|2541
*
3CPW|1|0|G|2618
3CPW|1|0|U|2619
3CPW|1|0|U|2620
3CPW|1|0|U|2621
3CPW|1|0|A|2622
3CPW|1|0|G|2623
*
3CPW|1|0|C|2641
3CPW|1|0|G|2642
3CPW|1|0|G|2643
3CPW|1|0|C|2644
3CPW|1|0|U|2645
3CPW|1|0|G|2646
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain 4
- 5'-R(*CP*CP*AP*(PHE)*(ACA))-3'
- Chain A
- 50S ribosomal protein L2P
- Chain B
- 50S ribosomal protein L3P
- Chain C
- 50S ribosomal protein L4P
- Chain K
- 50S ribosomal protein L15P
- Chain Q
- 50S ribosomal protein L22P
Coloring options: