J5_3G4S_006

3D structure

PDB id

3G4S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal structure of Tiamulin bound to the large ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GCAAGUUAG*UGCC*GGUC*GUGACUCGG*CAC

Length

29 nucleotides

Bulged bases

3G4S|1|0|G|1814, 3G4S|1|0|G|1819

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3G4S|1|0|G|1752
3G4S|1|0|C|1753
3G4S|1|0|A|1754
3G4S|1|0|A|1755
3G4S|1|0|G|1756
3G4S|1|0|U|1757
3G4S|1|0|U|1758
3G4S|1|0|A|1759
3G4S|1|0|G|1760
*
3G4S|1|0|U|1784
3G4S|1|0|G|1785
3G4S|1|0|C|1786
3G4S|1|0|C|1787
*
3G4S|1|0|G|1805
3G4S|1|0|G|1806
3G4S|1|0|U|1807
3G4S|1|0|C|1808
*
3G4S|1|0|G|1812
3G4S|1|0|U|1813
3G4S|1|0|G|1814
3G4S|1|0|A|1815
3G4S|1|0|C|1816
3G4S|1|0|U|1817
3G4S|1|0|C|1818
3G4S|1|0|G|1819
3G4S|1|0|G|1820
*
3G4S|1|0|C|2029
3G4S|1|0|A|2030
3G4S|1|0|C|2031

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain B

50S ribosomal protein L3P

Chain K

50S ribosomal protein L14P

Chain P

50S ribosomal protein L19e