J5_3G78_001

3D structure

PDB id

3G78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Insight into group II intron catalysis from revised crystal structure

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

UAUAG*CGAA*UUAG*CAAAC*GGAAA

Length

23 nucleotides

Bulged bases

3G78|1|A|A|245

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3G78|1|A|U|24
3G78|1|A|A|25
3G78|1|A|U|26
3G78|1|A|A|27
3G78|1|A|G|28
*
3G78|1|A|C|40
3G78|1|A|G|41
3G78|1|A|A|42
3G78|1|A|A|43
*
3G78|1|A|U|65
3G78|1|A|U|66
3G78|1|A|A|67
3G78|1|A|G|68
*
3G78|1|A|C|119
3G78|1|A|A|120
3G78|1|A|A|121
3G78|1|A|A|122
3G78|1|A|C|123
*
3G78|1|A|G|243
3G78|1|A|G|244
3G78|1|A|A|245
3G78|1|A|A|246
3G78|1|A|A|247

Current chains

Chain A

Group II intron

Nearby chains