J5_3J71_001
3D structure
- PDB id
- 3J71 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CCAGCG*CGUACG*CGGAGUCG*CAAAGCG*UAAG
- Length
- 31 nucleotides
- Bulged bases
- 3J71|1|5|G|156, 3J71|1|5|C|159, 3J71|1|5|C|309
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J71|1|5|C|111
3J71|1|5|C|112
3J71|1|5|A|113
3J71|1|5|G|114
3J71|1|5|C|115
3J71|1|5|G|116
*
3J71|1|5|C|155
3J71|1|5|G|156
3J71|1|5|U|157
3J71|1|5|A|158
3J71|1|5|C|159
3J71|1|5|G|160
*
3J71|1|5|C|276
3J71|1|5|G|277
3J71|1|5|G|278
3J71|1|5|A|279
3J71|1|5|G|280
3J71|1|5|U|281
3J71|1|5|C|282
3J71|1|5|G|283
*
3J71|1|5|C|304
3J71|1|5|A|305
3J71|1|5|A|306
3J71|1|5|A|307
3J71|1|5|G|308
3J71|1|5|C|309
3J71|1|5|G|310
*
3J71|1|5|U|327
3J71|1|5|A|328
3J71|1|5|A|329
3J71|1|5|G|330
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain G
- Ribosomal protein eL8
- Chain L
- Ribosomal protein eL13
- Chain N
- Ribosomal protein eL15
- Chain h
- Ribosomal protein uL29
- Chain i
- Ribosomal protein eL36
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