J5_3J71_004
3D structure
- PDB id
- 3J71 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GCAAGCCGG*UGGCU*AACUG*CGGACCAGG*CAC
- Length
- 31 nucleotides
- Bulged bases
- 3J71|1|5|G|3620, 3J71|1|5|G|3625
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J71|1|5|G|2855
3J71|1|5|C|2856
3J71|1|5|A|2857
3J71|1|5|A|2858
3J71|1|5|G|2859
3J71|1|5|C|2860
3J71|1|5|C|2861
3J71|1|5|G|2862
3J71|1|5|G|2863
*
3J71|1|5|U|2887
3J71|1|5|G|2888
3J71|1|5|G|2889
3J71|1|5|C|2890
3J71|1|5|U|2891
*
3J71|1|5|A|3610
3J71|1|5|A|3611
3J71|1|5|C|3612
3J71|1|5|U|3613
3J71|1|5|G|3614
*
3J71|1|5|C|3618
3J71|1|5|G|3619
3J71|1|5|G|3620
3J71|1|5|A|3621
3J71|1|5|C|3622
3J71|1|5|C|3623
3J71|1|5|A|3624
3J71|1|5|G|3625
3J71|1|5|G|3626
*
3J71|1|5|C|3835
3J71|1|5|A|3836
3J71|1|5|C|3837
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain B
- Ribosomal protein uL3
- Chain R
- Ribosomal protein eL19
- Chain V
- Ribosomal protein uL14
- Chain W
- Ribosomal protein eL24
Coloring options: