J5_3J7R_009
3D structure
- PDB id
- 3J7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUCCUAAGGC*GCUUG*CC*GGGGCCUCACGAUCC*GGUGUC
- Length
- 38 nucleotides
- Bulged bases
- 3J7R|1|5|C|4332, 3J7R|1|5|U|4374
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J7R|1|5|G|4228
3J7R|1|5|U|4229
3J7R|1|5|C|4230
3J7R|1|5|C|4231
3J7R|1|5|U|4232
3J7R|1|5|A|4233
3J7R|1|5|A|4234
3J7R|1|5|G|4235
3J7R|1|5|G|4236
3J7R|1|5|C|4237
*
3J7R|1|5|G|4287
3J7R|1|5|C|4288
3J7R|1|5|U|4289
3J7R|1|5|U|4290
3J7R|1|5|G|4291
*
3J7R|1|5|C|4318
3J7R|1|5|C|4319
*
3J7R|1|5|G|4328
3J7R|1|5|G|4329
3J7R|1|5|G|4330
3J7R|1|5|G|4331
3J7R|1|5|C|4332
3J7R|1|5|C|4333
3J7R|1|5|U|4334
3J7R|1|5|C|4335
3J7R|1|5|A|4336
3J7R|1|5|C|4337
3J7R|1|5|G|4338
3J7R|1|5|A|4339
3J7R|1|5|U|4340
3J7R|1|5|C|4341
3J7R|1|5|C|4342
*
3J7R|1|5|G|4370
3J7R|1|5|G|4371
3J7R|1|5|U|4372
3J7R|1|5|G|4373
3J7R|1|5|U|4374
3J7R|1|5|C|4375
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain D
- Ribosomal protein uL18
- Chain Q
- Ribosomal protein eL18
- Chain S6
- Transfer RNA; tRNA
- Chain T
- Ribosomal protein eL21
- Chain a
- Ribosomal protein uL15
- Chain o
- Ribosomal protein eL42
Coloring options: