J5_3J7R_010
3D structure
- PDB id
- 3J7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CUUGU*AAAUAAC*GGAAUGAG*CGAGGAUCCAUU*AUAG
- Length
- 36 nucleotides
- Bulged bases
- 3J7R|1|S2|A|590, 3J7R|1|S2|C|593
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J7R|1|S2|C|30
3J7R|1|S2|U|31
3J7R|1|S2|U|32
3J7R|1|S2|G|33
3J7R|1|S2|U|34
*
3J7R|1|S2|A|521
3J7R|1|S2|A|522
3J7R|1|S2|A|523
3J7R|1|S2|U|524
3J7R|1|S2|A|525
3J7R|1|S2|A|526
3J7R|1|S2|C|527
*
3J7R|1|S2|G|558
3J7R|1|S2|G|559
3J7R|1|S2|A|560
3J7R|1|S2|A|561
3J7R|1|S2|U|562
3J7R|1|S2|G|563
3J7R|1|S2|A|564
3J7R|1|S2|G|565
*
3J7R|1|S2|C|585
3J7R|1|S2|G|586
3J7R|1|S2|A|587
3J7R|1|S2|G|588
3J7R|1|S2|G|589
3J7R|1|S2|A|590
3J7R|1|S2|U|591
3J7R|1|S2|C|592
3J7R|1|S2|C|593
3J7R|1|S2|A|594
3J7R|1|S2|U|595
3J7R|1|S2|U|596
*
3J7R|1|S2|A|641
3J7R|1|S2|U|642
3J7R|1|S2|A|643
3J7R|1|S2|G|644
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SJ
- Ribosomal protein uS4
- Chain SX
- Ribosomal protein uS12
- Chain Se
- Ribosomal protein eS30
Coloring options: