J5_3JAG_001
3D structure
- PDB id
- 3JAG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- UG*CGAUGAAG*CGAACG*CG*UA
- Length
- 20 nucleotides
- Bulged bases
- 3JAG|1|8|U|38
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAG|1|5|U|20
3JAG|1|5|G|21
*
3JAG|1|8|C|35
3JAG|1|8|G|36
3JAG|1|8|A|37
3JAG|1|8|U|38
3JAG|1|8|G|39
3JAG|1|8|A|40
3JAG|1|8|A|41
3JAG|1|8|G|42
*
3JAG|1|8|C|101
3JAG|1|8|G|102
3JAG|1|8|A|103
3JAG|1|8|A|104
3JAG|1|8|C|105
3JAG|1|8|G|106
*
3JAG|1|8|C|113
3JAG|1|8|G|114
*
3JAG|1|8|U|136
3JAG|1|8|A|137
Current chains
- Chain 5
- 28S ribosomal RNA
- Chain 8
- 5.8S ribosomal RNA
Nearby chains
- Chain N
- eL15
- Chain X
- uL23
- Chain h
- uL29
- Chain j
- eL37
- Chain l
- eL39
Coloring options: