J5_3JAG_009
3D structure
- PDB id
- 3JAG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- AUCUUGGG*CCG*CGUU*AUGGAAUAG*CAUGAU
- Length
- 30 nucleotides
- Bulged bases
- 3JAG|1|9|C|687, 3JAG|1|9|G|798, 3JAG|1|9|U|871, 3JAG|1|9|A|913
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAG|1|9|A|685
3JAG|1|9|U|686
3JAG|1|9|C|687
3JAG|1|9|U|688
3JAG|1|9|U|689
3JAG|1|9|G|690
3JAG|1|9|G|691
3JAG|1|9|G|692
*
3JAG|1|9|C|738
3JAG|1|9|C|739
3JAG|1|9|G|744
*
3JAG|1|9|C|797
3JAG|1|9|G|798
3JAG|1|9|U|799
3JAG|1|9|U|800
*
3JAG|1|9|A|865
3JAG|1|9|U|866
3JAG|1|9|G|867
3JAG|1|9|G|868
3JAG|1|9|A|869
3JAG|1|9|A|870
3JAG|1|9|U|871
3JAG|1|9|A|872
3JAG|1|9|G|873
*
3JAG|1|9|C|912
3JAG|1|9|A|913
3JAG|1|9|U|914
3JAG|1|9|G|915
3JAG|1|9|A|916
3JAG|1|9|U|917
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain HH
- eS7
- Chain LL
- uS17
- Chain NN
- uS15
- Chain R
- eL19
- Chain WW
- uS8
- Chain XX
- uS12
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