J5_3JAI_010
3D structure
- PDB id
- 3JAI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- UCGCCACUU*AUGCCGACGGG*UGCAUU*ACCUCGGGCCGAU*ACGA
- Length
- 43 nucleotides
- Bulged bases
- 3JAI|1|9|G|126, 3JAI|1|9|C|139, 3JAI|1|9|C|142, 3JAI|1|9|G|183, 3JAI|1|9|G|215, 3JAI|1|9|U|305
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAI|1|9|U|124
3JAI|1|9|C|125
3JAI|1|9|G|126
3JAI|1|9|C|139
3JAI|1|9|C|140
3JAI|1|9|A|141
3JAI|1|9|C|142
3JAI|1|9|U|143
3JAI|1|9|U|144
*
3JAI|1|9|A|175
3JAI|1|9|U|176
3JAI|1|9|G|177
3JAI|1|9|C|178
3JAI|1|9|C|179
3JAI|1|9|G|180
3JAI|1|9|A|181
3JAI|1|9|C|182
3JAI|1|9|G|183
3JAI|1|9|G|184
3JAI|1|9|G|185
*
3JAI|1|9|U|214
3JAI|1|9|G|215
3JAI|1|9|C|216
3JAI|1|9|A|217
3JAI|1|9|U|218
3JAI|1|9|U|219
*
3JAI|1|9|A|302
3JAI|1|9|C|303
3JAI|1|9|C|304
3JAI|1|9|U|305
3JAI|1|9|C|306
3JAI|1|9|G|307
3JAI|1|9|G|308
3JAI|1|9|G|309
3JAI|1|9|C|310
3JAI|1|9|C|311
3JAI|1|9|G|312
3JAI|1|9|A|313
3JAI|1|9|U|314
*
3JAI|1|9|A|336
3JAI|1|9|C|337
3JAI|1|9|G|338
3JAI|1|9|A|339
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain EE
- eS4
- Chain GG
- eS6
- Chain II
- eS8
Coloring options: