J5_3JCD_005
3D structure
- PDB id
- 3JCD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GCAAAAUGGU*ACG*UC*GAUACCAGC*GGC
- Length
- 27 nucleotides
- Bulged bases
- 3JCD|1|A|U|1758, 3JCD|1|A|G|1763
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JCD|1|A|G|1674
3JCD|1|A|C|1675
3JCD|1|A|A|1676
3JCD|1|A|A|1677
3JCD|1|A|A|1678
3JCD|1|A|A|1679
3JCD|1|A|U|1680
3JCD|1|A|G|1681
3JCD|1|A|G|1682
3JCD|1|A|U|1683
*
3JCD|1|A|A|1705
3JCD|1|A|C|1706
3JCD|1|A|G|1707
*
3JCD|1|A|U|1751
3JCD|1|A|C|1752
*
3JCD|1|A|G|1756
3JCD|1|A|A|1757
3JCD|1|A|U|1758
3JCD|1|A|A|1759
3JCD|1|A|C|1760
3JCD|1|A|C|1761
3JCD|1|A|A|1762
3JCD|1|A|G|1763
3JCD|1|A|C|1764
*
3JCD|1|A|G|1988
3JCD|1|A|G|1989
3JCD|1|A|C|1990
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain K
- 50S ribosomal protein L14
- Chain P
- 50S ribosomal protein L19
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: