J5_3OW2_007

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CAAAGACC*GGAUAACA*UCGAUGU*GUUUAG*CGGCUG

Length

35 nucleotides

Bulged bases

3OW2|1|0|A|2103, 3OW2|1|0|A|2483, 3OW2|1|0|C|2644, 3OW2|1|0|U|2645

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3OW2|1|0|C|2098
3OW2|1|0|A|2099
3OW2|1|0|A|2100
3OW2|1|0|A|2101
3OW2|1|0|G|2102
3OW2|1|0|A|2103
3OW2|1|0|C|2104
3OW2|1|0|C|2105
*
3OW2|1|0|G|2481
3OW2|1|0|G|2482
3OW2|1|0|A|2483
3OW2|1|0|U|2484
3OW2|1|0|A|2485
3OW2|1|0|A|2486
3OW2|1|0|C|2487
3OW2|1|0|A|2488
*
3OW2|1|0|U|2535
3OW2|1|0|C|2536
3OW2|1|0|G|2537
3OW2|1|0|A|2538
3OW2|1|0|U|2539
3OW2|1|0|G|2540
3OW2|1|0|U|2541
*
3OW2|1|0|G|2618
3OW2|1|0|U|2619
3OW2|1|0|U|2620
3OW2|1|0|U|2621
3OW2|1|0|A|2622
3OW2|1|0|G|2623
*
3OW2|1|0|C|2641
3OW2|1|0|G|2642
3OW2|1|0|G|2643
3OW2|1|0|C|2644
3OW2|1|0|U|2645
3OW2|1|0|G|2646

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain A

50S ribosomal protein L2P

Chain B

50S ribosomal protein L3P

Chain C

50S ribosomal protein L4P

Chain K

50S ribosomal protein L15P