J5_3PIP_003
3D structure
- PDB id
- 3PIP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- CGACUUA*UAGAC*GUUC*GC*GCGGAUG
- Length
- 25 nucleotides
- Bulged bases
- 3PIP|1|X|U|1268
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3PIP|1|X|C|593
3PIP|1|X|G|594
3PIP|1|X|A|595
3PIP|1|X|C|596
3PIP|1|X|U|597
3PIP|1|X|U|598
3PIP|1|X|A|599
*
3PIP|1|X|U|680
3PIP|1|X|A|681
3PIP|1|X|G|682
3PIP|1|X|A|683
3PIP|1|X|C|684
*
3PIP|1|X|G|822
3PIP|1|X|U|823
3PIP|1|X|U|824
3PIP|1|X|C|825
*
3PIP|1|X|G|1209
3PIP|1|X|C|1210
*
3PIP|1|X|G|1263
3PIP|1|X|C|1264
3PIP|1|X|G|1265
3PIP|1|X|G|1266
3PIP|1|X|A|1267
3PIP|1|X|U|1268
3PIP|1|X|G|1269
Current chains
- Chain X
- RIBOSOMAL 23S RNA
Nearby chains
- Chain C
- 50S ribosomal protein L4
- Chain I
- 50S ribosomal protein L15
- Chain N
- 50S ribosomal protein L20
- Chain O
- 50S ribosomal protein L21
Coloring options: