J5_3R8O_001

3D structure

PDB id

3R8O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUGG*CGUG*CUUUC*GAAG*CAAG

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3R8O|1|A|C|36
3R8O|1|A|U|37
3R8O|1|A|G|38
3R8O|1|A|G|39
*
3R8O|1|A|C|403
3R8O|1|A|G|404
3R8O|1|A|U|405
3R8O|1|A|G|406
*
3R8O|1|A|C|436
3R8O|1|A|U|437
3R8O|1|A|U|438
3R8O|1|A|U|439
3R8O|1|A|C|440
*
3R8O|1|A|G|497
3R8O|1|A|A|498
3R8O|1|A|A|499
3R8O|1|A|G|500
*
3R8O|1|A|C|545
3R8O|1|A|A|546
3R8O|1|A|A|547
3R8O|1|A|G|548

Current chains

Chain A

16S rRNA

Nearby chains

Chain D

30S ribosomal protein S4

Chain L

30S ribosomal protein S12