J5_4ARC_001
3D structure
- PDB id
- 4ARC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and leucine in the editing conformation
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2 Å
Loop
- Sequence
- AUGG*CAA*UCG*UGUG*CU
- Length
- 16 nucleotides
- Bulged bases
- 4ARC|1|B|U|8, 4ARC|1|B|G|9, 4ARC|1|B|U|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_4ARC_001 not in the Motif Atlas
- Homologous match to J5_3ZGZ_001
- Geometric discrepancy: 0.1952
- The information below is about J5_3ZGZ_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_97113.1
- Basepair signature
- cWW-cWW-cWW-cWW-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
4ARC|1|B|A|7
4ARC|1|B|U|8
4ARC|1|B|G|9
4ARC|1|B|G|10
*
4ARC|1|B|C|25
4ARC|1|B|A|26
4ARC|1|B|A|27
*
4ARC|1|B|U|43
4ARC|1|B|C|44
4ARC|1|B|G|45
*
4ARC|1|B|U|47|||I
4ARC|1|B|G|47|||J
4ARC|1|B|U|48
4ARC|1|B|G|49
*
4ARC|1|B|C|65
4ARC|1|B|U|66
Current chains
- Chain B
- TRNA-LEU5 (UAA ISOACCEPTOR)
Nearby chains
- Chain A
- LEUCINE--TRNA LIGASE
Coloring options: