J5_4BTS_006

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

ACUUCU*AUACG*CAUUU*AUGGAAUAGGA*UAAUGAU

Length

34 nucleotides

Bulged bases

4BTS|1|AA|U|633, 4BTS|1|AA|U|674, 4BTS|1|AA|C|676, 4BTS|1|AA|U|796, 4BTS|1|AA|A|834

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4BTS|1|AA|A|630
4BTS|1|AA|C|631
4BTS|1|AA|U|632
4BTS|1|AA|U|633
4BTS|1|AA|C|634
4BTS|1|AA|U|635
*
4BTS|1|AA|A|673
4BTS|1|AA|U|674
4BTS|1|AA|A|675
4BTS|1|AA|C|676
4BTS|1|AA|G|677
*
4BTS|1|AA|C|724
4BTS|1|AA|A|725
4BTS|1|AA|U|726
4BTS|1|AA|U|727
4BTS|1|AA|U|728
*
4BTS|1|AA|A|790
4BTS|1|AA|U|791
4BTS|1|AA|G|792
4BTS|1|AA|G|793
4BTS|1|AA|A|794
4BTS|1|AA|A|795
4BTS|1|AA|U|796
4BTS|1|AA|A|797
4BTS|1|AA|G|798
4BTS|1|AA|G|799
4BTS|1|AA|A|800
*
4BTS|1|AA|U|832
4BTS|1|AA|A|833
4BTS|1|AA|A|834
4BTS|1|AA|U|835
4BTS|1|AA|G|836
4BTS|1|AA|A|837
4BTS|1|AA|U|838

Current chains

Chain AA

18S ribosomal RNA

Nearby chains

Chain A3

40S RIBOSOMAL PROTEIN RPS7E

Chain AH

40S RIBOSOMAL PROTEIN RPS22E

Chain AL

40S RIBOSOMAL PROTEIN S12

Chain AO

40S RIBOSOMAL PROTEIN RPS13E

Chain AQ

40S RIBOSOMAL PROTEIN RPS11E