J5_4BTS_011
3D structure
- PDB id
- 4BTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- UAAUUAAAGAUUACAU*AUGCUUAAAAU*ACG*CGGAU*AUAAA
- Length
- 40 nucleotides
- Bulged bases
- 4BTS|1|BA|U|124, 4BTS|1|BA|C|134, 4BTS|1|BA|A|135, 4BTS|1|BA|U|172
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4BTS|1|BA|U|121
4BTS|1|BA|A|122
4BTS|1|BA|A|123
4BTS|1|BA|U|124
4BTS|1|BA|U|125
4BTS|1|BA|A|126
4BTS|1|BA|A|127
4BTS|1|BA|A|128
4BTS|1|BA|G|129
4BTS|1|BA|A|130
4BTS|1|BA|U|131
4BTS|1|BA|U|132
4BTS|1|BA|A|133
4BTS|1|BA|C|134
4BTS|1|BA|A|135
4BTS|1|BA|U|136
*
4BTS|1|BA|A|167
4BTS|1|BA|U|168
4BTS|1|BA|G|169
4BTS|1|BA|C|170
4BTS|1|BA|U|171
4BTS|1|BA|U|172
4BTS|1|BA|A|173
4BTS|1|BA|A|174
4BTS|1|BA|A|175
4BTS|1|BA|A|176
4BTS|1|BA|U|177
*
4BTS|1|BA|A|197
4BTS|1|BA|C|198
4BTS|1|BA|G|199
*
4BTS|1|BA|C|260
4BTS|1|BA|G|261
4BTS|1|BA|G|262
4BTS|1|BA|A|263
4BTS|1|BA|U|264
*
4BTS|1|BA|A|279
4BTS|1|BA|U|280
4BTS|1|BA|A|281
4BTS|1|BA|A|282
4BTS|1|BA|A|283
Current chains
- Chain BA
- 18S ribosomal RNA
Nearby chains
- Chain B2
- 40S RIBOSOMAL PROTEIN S8
- Chain BW
- 40S RIBOSOMAL PROTEIN RPS4E
- Chain BY
- 40S RIBOSOMAL PROTEIN S6
Coloring options: