J5_4BTS_014

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

CUUGU*AAAUAGC*GAAAUGAG*CGAGGAACAAU*AUAG

Length

35 nucleotides

Bulged bases

4BTS|1|CA|A|534

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4BTS|1|CA|C|30
4BTS|1|CA|U|31
4BTS|1|CA|U|32
4BTS|1|CA|G|33
4BTS|1|CA|U|34
*
4BTS|1|CA|A|465
4BTS|1|CA|A|466
4BTS|1|CA|A|467
4BTS|1|CA|U|468
4BTS|1|CA|A|469
4BTS|1|CA|G|470
4BTS|1|CA|C|471
*
4BTS|1|CA|G|502
4BTS|1|CA|A|503
4BTS|1|CA|A|504
4BTS|1|CA|A|505
4BTS|1|CA|U|506
4BTS|1|CA|G|507
4BTS|1|CA|A|508
4BTS|1|CA|G|509
*
4BTS|1|CA|C|529
4BTS|1|CA|G|530
4BTS|1|CA|A|531
4BTS|1|CA|G|532
4BTS|1|CA|G|533
4BTS|1|CA|A|534
4BTS|1|CA|A|535
4BTS|1|CA|C|536
4BTS|1|CA|A|537
4BTS|1|CA|A|538
4BTS|1|CA|U|539
*
4BTS|1|CA|A|586
4BTS|1|CA|U|587
4BTS|1|CA|A|588
4BTS|1|CA|G|589

Current chains

Chain CA

18S ribosomal RNA

Nearby chains

Chain B9

40S RIBOSOMAL PROTEIN RPS31E

Chain CD

40S RIBOSOMAL PROTEIN RPS9E

Chain CL

40S RIBOSOMAL PROTEIN S12

Chain CX

40S RIBOSOMAL PROTEIN RPS30E