Loop J5_4KZX

3D structure

PDB id: 4KZX (explore in PDB, NAKB, or RNA 3D Hub)
Description: Rabbit 40S ribosomal subunit in complex with eIF1.
Experimental method: X-RAY DIFFRACTION
Resolution: 7.81 Å

Loop

Sequence: GUCGCUCGCUCCUCUCCUACUU*AUGCCGACGGC*GUG*CCGAU*ACGACC
Length: 47 nucleotides
Bulged bases: 4KZX|1|i|G|126, 4KZX|1|i|U|128, 4KZX|1|i|C|129, 4KZX|1|i|G|130, 4KZX|1|i|C|131, 4KZX|1|i|U|132, 4KZX|1|i|C|133, 4KZX|1|i|C|134, 4KZX|1|i|U|135, 4KZX|1|i|C|136, 4KZX|1|i|U|137, 4KZX|1|i|C|138, 4KZX|1|i|C|139, 4KZX|1|i|C|142
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

4KZX|1|i|G|123
4KZX|1|i|U|124
4KZX|1|i|C|125
4KZX|1|i|G|126
4KZX|1|i|C|127
4KZX|1|i|U|128
4KZX|1|i|C|129
4KZX|1|i|G|130
4KZX|1|i|C|131
4KZX|1|i|U|132
4KZX|1|i|C|133
4KZX|1|i|C|134
4KZX|1|i|U|135
4KZX|1|i|C|136
4KZX|1|i|U|137
4KZX|1|i|C|138
4KZX|1|i|C|139
4KZX|1|i|U|140
4KZX|1|i|A|141
4KZX|1|i|C|142
4KZX|1|i|U|143
4KZX|1|i|U|144
*
4KZX|1|i|A|175
4KZX|1|i|U|176
4KZX|1|i|G|177
4KZX|1|i|C|178
4KZX|1|i|C|179
4KZX|1|i|G|180
4KZX|1|i|A|181
4KZX|1|i|C|182
4KZX|1|i|G|183
4KZX|1|i|G|184
4KZX|1|i|C|185
*
4KZX|1|i|G|210
4KZX|1|i|U|211
4KZX|1|i|G|212
*
4KZX|1|i|C|301
4KZX|1|i|C|302
4KZX|1|i|G|303
4KZX|1|i|A|304
4KZX|1|i|U|305
*
4KZX|1|i|A|326
4KZX|1|i|C|327
4KZX|1|i|G|328
4KZX|1|i|A|329
4KZX|1|i|C|330
4KZX|1|i|C|331

Current chains

Chain i: 18S ribosomal RNA

Nearby chains

Chain E: 40S ribosomal protein S4X
Chain G: 40S ribosomal protein S6
Chain I: 40S ribosomal protein S8

J5_4KZX_004