J5_4KZZ_001

3D structure

PDB id

4KZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

7.03 Å

Loop

Sequence

CUUGU*AAAUAAC*GGAAUGAG*CGAGGAUCCAU*AUAG

Length

35 nucleotides

Bulged bases

4KZZ|1|i|A|580, 4KZZ|1|i|C|583

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4KZZ|1|i|C|30
4KZZ|1|i|U|31
4KZZ|1|i|U|32
4KZZ|1|i|G|33
4KZZ|1|i|U|34
*
4KZZ|1|i|A|511
4KZZ|1|i|A|512
4KZZ|1|i|A|513
4KZZ|1|i|U|514
4KZZ|1|i|A|515
4KZZ|1|i|A|516
4KZZ|1|i|C|517
*
4KZZ|1|i|G|548
4KZZ|1|i|G|549
4KZZ|1|i|A|550
4KZZ|1|i|A|551
4KZZ|1|i|U|552
4KZZ|1|i|G|553
4KZZ|1|i|A|554
4KZZ|1|i|G|555
*
4KZZ|1|i|C|575
4KZZ|1|i|G|576
4KZZ|1|i|A|577
4KZZ|1|i|G|578
4KZZ|1|i|G|579
4KZZ|1|i|A|580
4KZZ|1|i|U|581
4KZZ|1|i|C|582
4KZZ|1|i|C|583
4KZZ|1|i|A|584
4KZZ|1|i|U|585
*
4KZZ|1|i|A|631
4KZZ|1|i|U|632
4KZZ|1|i|A|633
4KZZ|1|i|G|634

Current chains

Chain i

18S Ribosomal RNA

Nearby chains

Chain J

40S Ribosomal Protein S9

Chain X

40S Ribosomal Protein S23

Chain Y

40S Ribosomal Protein S24

Chain e

40S Ribosomal Protein S30