3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
AAAAGACC*GGAUAACA*UCGAUGUC*GGUUCAG*CGGUCU
Length
37 nucleotides
Bulged bases
4LEL|1|YA|A|2062, 4LEL|1|YA|A|2448, 4LEL|1|YA|U|2609
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4LEL|1|YA|A|2057
4LEL|1|YA|A|2058
4LEL|1|YA|A|2059
4LEL|1|YA|A|2060
4LEL|1|YA|G|2061
4LEL|1|YA|A|2062
4LEL|1|YA|C|2063
4LEL|1|YA|C|2064
*
4LEL|1|YA|G|2446
4LEL|1|YA|G|2447
4LEL|1|YA|A|2448
4LEL|1|YA|U|2449
4LEL|1|YA|A|2450
4LEL|1|YA|A|2451
4LEL|1|YA|C|2452
4LEL|1|YA|A|2453
*
4LEL|1|YA|U|2500
4LEL|1|YA|C|2501
4LEL|1|YA|G|2502
4LEL|1|YA|A|2503
4LEL|1|YA|U|2504
4LEL|1|YA|G|2505
4LEL|1|YA|U|2506
4LEL|1|YA|C|2507
*
4LEL|1|YA|G|2582
4LEL|1|YA|G|2583
4LEL|1|YA|U|2584
4LEL|1|YA|U|2585
4LEL|1|YA|C|2586
4LEL|1|YA|A|2587
4LEL|1|YA|G|2588
*
4LEL|1|YA|C|2606
4LEL|1|YA|G|2607
4LEL|1|YA|G|2608
4LEL|1|YA|U|2609
4LEL|1|YA|C|2610
4LEL|1|YA|U|2611

Current chains

Chain YA
23S rRNA

Nearby chains

Chain XV
Transfer RNA; tRNA
Chain Y0
50S ribosomal protein L27
Chain Y5
50S ribosomal protein L32
Chain YD
50S ribosomal protein L2
Chain YE
50S ribosomal protein L3
Chain YF
50S ribosomal protein L4
Chain YW
50S ribosomal protein L22
Chain Z8
tRNA acceptor end mimic

Coloring options:

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