3D structure

PDB id
4LSK (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.48 Å

Loop

Sequence
CGAG*CGUAG*CGAG*CGCAAG*CAAAG
Length
24 nucleotides
Bulged bases
4LSK|1|YA|A|654
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4LSK|1|YA|C|601
4LSK|1|YA|G|602
4LSK|1|YA|A|603
4LSK|1|YA|G|604
*
4LSK|1|YA|C|624
4LSK|1|YA|G|625
4LSK|1|YA|U|626
4LSK|1|YA|A|627
4LSK|1|YA|G|628
*
4LSK|1|YA|C|635
4LSK|1|YA|G|636
4LSK|1|YA|A|637
4LSK|1|YA|G|638
*
4LSK|1|YA|C|650
4LSK|1|YA|G|651
4LSK|1|YA|C|652
4LSK|1|YA|A|653
4LSK|1|YA|A|654
4LSK|1|YA|G|654|||A
*
4LSK|1|YA|C|654|||T
4LSK|1|YA|A|654|||U
4LSK|1|YA|A|654|||V
4LSK|1|YA|A|655
4LSK|1|YA|G|656

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y8
50S ribosomal protein L35
Chain YF
50S ribosomal protein L4
Chain YP
50S ribosomal protein L15

Coloring options:

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