J5_4LT8_004

3D structure

PDB id

4LT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

CUAAAC*GGGUCGUG*CGAGUAC*GGAAUCUG*UAAG

Length

33 nucleotides

Bulged bases

4LT8|1|RA|U|271|||C, 4LT8|1|RA|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4LT8|1|RA|C|268
4LT8|1|RA|U|269
4LT8|1|RA|A|270
4LT8|1|RA|A|270|||A
4LT8|1|RA|A|270|||B
4LT8|1|RA|C|270|||C
*
4LT8|1|RA|G|270|||W
4LT8|1|RA|G|270|||X
4LT8|1|RA|G|270|||Y
4LT8|1|RA|U|270|||Z
4LT8|1|RA|C|271|||A
4LT8|1|RA|G|271|||B
4LT8|1|RA|U|271|||C
4LT8|1|RA|G|271
*
4LT8|1|RA|C|366
4LT8|1|RA|G|370
4LT8|1|RA|A|371
4LT8|1|RA|G|372
4LT8|1|RA|U|373
4LT8|1|RA|A|374
4LT8|1|RA|C|375
*
4LT8|1|RA|G|399
4LT8|1|RA|G|400
4LT8|1|RA|A|401
4LT8|1|RA|A|402
4LT8|1|RA|U|403
4LT8|1|RA|C|404
4LT8|1|RA|U|405
4LT8|1|RA|G|406
*
4LT8|1|RA|U|421
4LT8|1|RA|A|422
4LT8|1|RA|A|423
4LT8|1|RA|G|424

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R1

50S ribosomal protein L27

Chain RI

50S ribosomal protein L9