J5_4P70_019

3D structure

PDB id

4P70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

CUAAAC*GGGUCGUG*CGAGUAC*GGAAUCUG*UAAG

Length

33 nucleotides

Bulged bases

4P70|1|RA|U|271|||C, 4P70|1|RA|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4P70|1|RA|C|268
4P70|1|RA|U|269
4P70|1|RA|A|270
4P70|1|RA|A|270|||A
4P70|1|RA|A|270|||B
4P70|1|RA|C|270|||C
*
4P70|1|RA|G|270|||W
4P70|1|RA|G|270|||X
4P70|1|RA|G|270|||Y
4P70|1|RA|U|270|||Z
4P70|1|RA|C|271|||A
4P70|1|RA|G|271|||B
4P70|1|RA|U|271|||C
4P70|1|RA|G|271
*
4P70|1|RA|C|366
4P70|1|RA|G|370
4P70|1|RA|A|371
4P70|1|RA|G|372
4P70|1|RA|U|373
4P70|1|RA|A|374
4P70|1|RA|C|375
*
4P70|1|RA|G|399
4P70|1|RA|G|400
4P70|1|RA|A|401
4P70|1|RA|A|402
4P70|1|RA|U|403
4P70|1|RA|C|404
4P70|1|RA|U|405
4P70|1|RA|G|406
*
4P70|1|RA|U|421
4P70|1|RA|A|422
4P70|1|RA|A|423
4P70|1|RA|G|424

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R1

50S ribosomal protein L28

Chain RI

50S ribosomal protein L9