J5_4TUD_018
3D structure
- PDB id
- 4TUD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of ASL-SufJ bound to Codon ACC-C on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- AAAAGACC*GGAUAACA*UCGAUGUC*GGUUCAG*CGGUCU
- Length
- 37 nucleotides
- Bulged bases
- 4TUD|1|YA|A|2062, 4TUD|1|YA|A|2448, 4TUD|1|YA|U|2609
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4TUD|1|YA|A|2057
4TUD|1|YA|A|2058
4TUD|1|YA|A|2059
4TUD|1|YA|A|2060
4TUD|1|YA|G|2061
4TUD|1|YA|A|2062
4TUD|1|YA|C|2063
4TUD|1|YA|C|2064
*
4TUD|1|YA|G|2446
4TUD|1|YA|G|2447
4TUD|1|YA|A|2448
4TUD|1|YA|U|2449
4TUD|1|YA|A|2450
4TUD|1|YA|A|2451
4TUD|1|YA|C|2452
4TUD|1|YA|A|2453
*
4TUD|1|YA|U|2500
4TUD|1|YA|C|2501
4TUD|1|YA|G|2502
4TUD|1|YA|A|2503
4TUD|1|YA|U|2504
4TUD|1|YA|G|2505
4TUD|1|YA|U|2506
4TUD|1|YA|C|2507
*
4TUD|1|YA|G|2582
4TUD|1|YA|G|2583
4TUD|1|YA|U|2584
4TUD|1|YA|U|2585
4TUD|1|YA|C|2586
4TUD|1|YA|A|2587
4TUD|1|YA|G|2588
*
4TUD|1|YA|C|2606
4TUD|1|YA|G|2607
4TUD|1|YA|G|2608
4TUD|1|YA|U|2609
4TUD|1|YA|C|2610
4TUD|1|YA|U|2611
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain XV
- Transfer RNA; tRNA
- Chain Y0
- 50S ribosomal protein L27
- Chain Y5
- 50S ribosomal protein L32
- Chain YD
- 50S ribosomal protein L2
- Chain YE
- 50S ribosomal protein L3
- Chain YF
- 50S ribosomal protein L4
- Chain YW
- 50S ribosomal protein L22
- Chain Z6
- CC-Puro
Coloring options: