J5_4U3U_007

3D structure

PDB id

4U3U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Cycloheximide bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUUGU*AAAUAAC*GGAAUGAG*CGAGGAACAAU*AUAG

Length

35 nucleotides

Bulged bases

4U3U|1|2|A|538, 4U3U|1|2|A|541, 4U3U|1|2|A|544

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U3U|1|2|C|31
4U3U|1|2|U|32
4U3U|1|2|U|33
4U3U|1|2|G|34
4U3U|1|2|U|35
*
4U3U|1|2|A|473
4U3U|1|2|A|474
4U3U|1|2|A|475
4U3U|1|2|U|476
4U3U|1|2|A|477
4U3U|1|2|A|478
4U3U|1|2|C|479
*
4U3U|1|2|G|509
4U3U|1|2|G|510
4U3U|1|2|A|511
4U3U|1|2|A|512
4U3U|1|2|U|513
4U3U|1|2|G|514
4U3U|1|2|A|515
4U3U|1|2|G|516
*
4U3U|1|2|C|536
4U3U|1|2|G|537
4U3U|1|2|A|538
4U3U|1|2|G|539
4U3U|1|2|G|540
4U3U|1|2|A|541
4U3U|1|2|A|542
4U3U|1|2|C|543
4U3U|1|2|A|544
4U3U|1|2|A|545
4U3U|1|2|U|546
*
4U3U|1|2|A|592
4U3U|1|2|U|593
4U3U|1|2|A|594
4U3U|1|2|G|595

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain D3

40S ribosomal protein S23-A

Chain E0

40S ribosomal protein S30-A

Chain S9

40S ribosomal protein S9-A