J5_4U51_011
3D structure
- PDB id
- 4U51 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Narciclasine bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- ACUUUG*UUUCCUU*GACUUU*AUAGAAUAGGA*UAAUGAU
- Length
- 37 nucleotides
- Bulged bases
- 4U51|1|2|U|638, 4U51|1|2|C|696, 4U51|1|2|C|697, 4U51|1|2|U|813, 4U51|1|2|G|815, 4U51|1|2|A|856
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4U51|1|2|A|636
4U51|1|2|C|637
4U51|1|2|U|638
4U51|1|2|U|639
4U51|1|2|U|640
4U51|1|2|G|641
*
4U51|1|2|U|693
4U51|1|2|U|694
4U51|1|2|U|695
4U51|1|2|C|696
4U51|1|2|C|697
4U51|1|2|U|698
4U51|1|2|U|699
*
4U51|1|2|G|739
4U51|1|2|A|740
4U51|1|2|C|741
4U51|1|2|U|742
4U51|1|2|U|743
4U51|1|2|U|744
*
4U51|1|2|A|807
4U51|1|2|U|808
4U51|1|2|A|809
4U51|1|2|G|810
4U51|1|2|A|811
4U51|1|2|A|812
4U51|1|2|U|813
4U51|1|2|A|814
4U51|1|2|G|815
4U51|1|2|G|816
4U51|1|2|A|817
*
4U51|1|2|U|854
4U51|1|2|A|855
4U51|1|2|A|856
4U51|1|2|U|857
4U51|1|2|G|858
4U51|1|2|A|859
4U51|1|2|U|860
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain C1
- 40S ribosomal protein S11-A
- Chain C3
- 40S ribosomal protein S13
- Chain D2
- 40S ribosomal protein S22-A
- Chain M9
- 60S ribosomal protein L19-A
- Chain S4
- 40S ribosomal protein S4-A
- Chain S7
- 40S ribosomal protein S7-A
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