J5_4V5G_001

3D structure

PDB id

4V5G (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the 70S ribosome bound to EF-Tu and tRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CUGG*CUUG*CUGAACCC*GGGGUAAUAG*CGAG

Length

30 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5G|1|AA|C|36
4V5G|1|AA|U|37
4V5G|1|AA|G|38
4V5G|1|AA|G|39
*
4V5G|1|AA|C|403
4V5G|1|AA|U|404
4V5G|1|AA|U|405
4V5G|1|AA|G|406
*
4V5G|1|AA|C|436
4V5G|1|AA|U|437
4V5G|1|AA|G|438
4V5G|1|AA|A|439
4V5G|1|AA|A|441
4V5G|1|AA|C|442
4V5G|1|AA|C|443
4V5G|1|AA|C|444
*
4V5G|1|AA|G|490
4V5G|1|AA|G|491
4V5G|1|AA|G|492
4V5G|1|AA|G|493
4V5G|1|AA|U|494
4V5G|1|AA|A|495
4V5G|1|AA|A|496
4V5G|1|AA|U|498
4V5G|1|AA|A|499
4V5G|1|AA|G|500
*
4V5G|1|AA|C|545
4V5G|1|AA|G|546
4V5G|1|AA|A|547
4V5G|1|AA|G|548

Current chains

Chain AA

16S RIBOSOMAL RNA

Nearby chains

Chain AD

30S RIBOSOMAL PROTEIN S4

Chain AL

30S RIBOSOMAL PROTEIN S12

Chain AZ

ELONGATION FACTOR TU-A